MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus arlettae
19428wH1_IOV5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 80
bases: 2,607,375 bps
CDS: 2,506
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,580
Total number of protein coding genes annotated/found:
2,506
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5016|JADGMC010000049.1
SEQF5016_01740
Genome Viewer
NA
AA
579/193
636-58
IS3 family transposase ISSau2
SEQF5016|JADGMC010000049.1
SEQF5016_01741
Genome Viewer
NA
AA
729/243
1598-870
IS3 family transposase ISSau2
SEQF5016|JADGMC010000019.1
SEQF5016_00661
Genome Viewer
NA
AA
3456/1152
3655-200
Pyruvate carboxylase
SEQF5016|JADGMC010000019.1
SEQF5016_00662
Genome Viewer
NA
AA
1230/410
5235-4006
putative peptidoglycan glycosyltransferase FtsW
SEQF5016|JADGMC010000019.1
SEQF5016_00663
Genome Viewer
NA
AA
276/92
5835-5560
hypothetical protein
SEQF5016|JADGMC010000019.1
SEQF5016_00664
Genome Viewer
NA
AA
483/161
6190-6672
hypothetical protein
SEQF5016|JADGMC010000019.1
SEQF5016_00665
Genome Viewer
NA
AA
174/58
6675-6848
hypothetical protein
SEQF5016|JADGMC010000019.1
SEQF5016_00666
Genome Viewer
NA
AA
1848/616
8741-6894
GTP-binding protein TypA/BipA
SEQF5016|JADGMC010000019.1
SEQF5016_00667
Genome Viewer
NA
AA
198/66
8840-9037
hypothetical protein
SEQF5016|JADGMC010000019.1
SEQF5016_00668
Genome Viewer
NA
AA
822/274
9939-9118
Inositol-1-monophosphatase
SEQF5016|JADGMC010000019.1
SEQF5016_00669
Genome Viewer
NA
AA
615/205
10151-10765
hypothetical protein
SEQF5016|JADGMC010000019.1
SEQF5016_00670
Genome Viewer
NA
AA
474/158
11288-10815
hypothetical protein
SEQF5016|JADGMC010000019.1
SEQF5016_00671
Genome Viewer
NA
AA
1152/384
12605-11454
hypothetical protein
SEQF5016|JADGMC010000019.1
SEQF5016_00672
Genome Viewer
NA
AA
1074/358
13751-12678
Spermidine/putrescine-binding periplasmic protein
SEQF5016|JADGMC010000019.1
SEQF5016_00673
Genome Viewer
NA
AA
813/271
14560-13748
Inner membrane ABC transporter permease protein YdcV
SEQF5016|JADGMC010000019.1
SEQF5016_00674
Genome Viewer
NA
AA
804/268
15369-14566
Spermidine/putrescine transport system permease protein PotB
SEQF5016|JADGMC010000019.1
SEQF5016_00675
Genome Viewer
NA
AA
1095/365
16456-15362
Spermidine/putrescine import ATP-binding protein PotA
SEQF5016|JADGMC010000019.1
SEQF5016_00676
Genome Viewer
NA
AA
279/93
17109-16831
hypothetical protein
SEQF5016|JADGMC010000019.1
SEQF5016_00677
Genome Viewer
NA
AA
1407/469
18650-17244
Dihydrolipoyl dehydrogenase
SEQF5016|JADGMC010000019.1
SEQF5016_00678
Genome Viewer
NA
AA
1290/430
19943-18654
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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